ECOD: domain e3s7vB1

Domain ID e3s7vB1

A: beta sandwiches
X: jelly-roll
H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
F: Polyoma_coat

UID:	000423232
Type:	Automatic domain
Parent:	e1vpsA1
Range:	B:35-303
PDB:	3s7v
PDB Description:	Major capsid protein VP1
UniProt:	A3R4N3
Species:	KI polyomavirus

Domains in the same chain:

Download Pymol

e3s7vB1	B:35-303	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)

Domains in the same PDB:

e3s7vA1	A:35-304	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s7vB1	B:35-303	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s7vC1	C:34-304	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s7vD1	D:34-304	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s7vE1	E:35-304	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s7vF1	F:30-304	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s7vG1	G:35-304	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s7vH1	H:34-303	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s7vI1	I:36-304	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3s7vJ1	J:35-304	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)

Structural contacts of domain e3s7vB1 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3s7vC1	B:X,Y,Z->C:x,y,z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e3s7vA1	B:x,y,z->A:X,Y,Z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e3s7vI1	B:X,Y,Z-1->I:x,y,z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e3s7vJ1	B:X,Y,Z-1->J:x,y,z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e3s7vD1	B:X,Y-1,Z->D:x,y,z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol