Domain ID e3s7xD1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: Polyoma_coat
UID: 000423244
Type: Automatic domain
Parent: e1vpsA1
Range: D:35-296
Ligands: CL GOL NA
PDB: 3s7x
PDB Description: MAJOR CAPSID PROTEIN VP1
UniProt: A5HBD5
Species: WU Polyomavirus

Structure of domain e3s7xD1

Structural contacts of domain e3s7xD1 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3s7xC1 D:x,y,z->C:X,Y,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3s7xE1 D:X,Y,Z->E:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3s7xD1 D:x,y,z->D:Y,X,-Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3s7xD1 D:Y,X,-Z->D:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3s7xD1 D:x,y,z->D:-Y,-X,-Z-1/2 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3s7xD1 D:-Y,-X,-Z-1/2->D:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3s7xB1 D:x,y,z->B:-Y,-X,-Z+1/2 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol