ECOD: domain e3s8vB4

Domain ID e3s8vB4

A: few secondary structure elements
X: EGF-like
H: EGF-related
T: EGF/Laminin
F: FXa_inhibition

UID:	001395296
Type:	Automatic domain
Parent:	e2p3uA1
Range:	B:1198-1243
PDB:	3s8v
PDB Description:	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 6
UniProt:	O75581
Hsap BLAST neighbor:	O75581
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3s8vB4

Domains in the same chain:

Download Pymol

e3s8vB3	B:631-889	beta-propeller-like	beta-propeller	6-bladed
e3s8vB1	B:890-931	EGF-like	EGF-related	EGF/Laminin
e3s8vB2	B:932-1197	beta-propeller-like	beta-propeller	6-bladed
e3s8vB4	B:1198-1243	EGF-like	EGF-related	EGF/Laminin

Domains in the same PDB:

e3s8vA1	A:629-889	beta-propeller-like	beta-propeller	6-bladed
e3s8vA5	A:890-931	EGF-like	EGF-related	EGF/Laminin
e3s8vA6	A:932-1197	beta-propeller-like	beta-propeller	6-bladed
e3s8vA7	A:1198-1243	EGF-like	EGF-related	EGF/Laminin
e3s8vB3	B:631-889	beta-propeller-like	beta-propeller	6-bladed
e3s8vB1	B:890-931	EGF-like	EGF-related	EGF/Laminin
e3s8vB2	B:932-1197	beta-propeller-like	beta-propeller	6-bladed
e3s8vB4	B:1198-1243	EGF-like	EGF-related	EGF/Laminin
e3s8vX2	X:184-215	omega toxin-like	omega toxin-related	Colipase-like
e3s8vX1	X:216-265	omega toxin-like	omega toxin-related	Colipase-like

Structural contacts of domain e3s8vB4 of H-group "EGF-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3s8vA1	B:x,y,z->A:-X-1,Y-1/2,-Z-1/2	beta-propeller	Interaction Interface Pymol
e3s8vA6	B:x,y,z->A:-X-1/2,-Y,Z-1/2	beta-propeller	Interaction Interface Pymol
e3s8vX1	B:x,y,z->X:-X-1,Y-1/2,-Z-1/2	omega toxin-related	Interaction Interface Pymol
e3s8vX2	B:x,y,z->X:-X-1,Y-1/2,-Z-1/2	omega toxin-related	Interaction Interface Pymol