Domain ID e3sboD2

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  • A: a/b three-layered sandwiches
  • X: Flavodoxin-like
  • H: Class I glutamine amidotransferase-like
  • T: Aminoacid dehydrogenase-like, N-terminal domain
  • F: ELFV_dehydrog_N
UID: 001853418
Type: Automatic domain
Parent: e1bgvA2
Range: D:6-196
Ligands: CL
PDB: 3sbo
PDB Description: NADP-specific glutamate dehydrogenase
UniProt: P00370
Hsap BLAST neighbor: P49448
Species:

Structure of domain e3sboD2

Domains in the same chain:

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e3sboD2 D:6-196 Flavodoxin-like Class I glutamine amidotransferase-like Aminoacid dehydrogenase-like, N-terminal domain
e3sboD1 D:189-439 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains

Domains in the same PDB:

e3sboA2 A:6-196 Flavodoxin-like Class I glutamine amidotransferase-like Aminoacid dehydrogenase-like, N-terminal domain
e3sboA1 A:197-447 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3sboB2 B:6-196 Flavodoxin-like Class I glutamine amidotransferase-like Aminoacid dehydrogenase-like, N-terminal domain
e3sboB1 B:189-439 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3sboC2 C:6-196 Flavodoxin-like Class I glutamine amidotransferase-like Aminoacid dehydrogenase-like, N-terminal domain
e3sboC1 C:189-439 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3sboD2 D:6-196 Flavodoxin-like Class I glutamine amidotransferase-like Aminoacid dehydrogenase-like, N-terminal domain
e3sboD1 D:189-439 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3sboE2 E:6-196 Flavodoxin-like Class I glutamine amidotransferase-like Aminoacid dehydrogenase-like, N-terminal domain
e3sboE1 E:189-439 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3sboF2 F:6-196 Flavodoxin-like Class I glutamine amidotransferase-like Aminoacid dehydrogenase-like, N-terminal domain
e3sboF1 F:189-439 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains

Structural contacts of domain e3sboD2 of H-group "Class I glutamine amidotransferase-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3sboB2 D:x,y,z->B:X,Y,Z Class I glutamine amidotransferase-like Interaction Interface Pymol
e3sboA1 D:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e3sboA2 D:x,y,z->A:X,Y,Z Class I glutamine amidotransferase-like Interaction Interface Pymol
e3sboE2 D:X,Y,Z->E:x,y,z Class I glutamine amidotransferase-like Interaction Interface Pymol
e3sboF2 D:X,Y,Z->F:x,y,z Class I glutamine amidotransferase-like Interaction Interface Pymol
e3sboF1 D:X-1/2,-Y+3/2,-Z+1->F:x,y,z Rossmann-related Interaction Interface Pymol
e3sboD1 D:x,y,z->D:X-1/2,-Y+3/2,-Z+1 Rossmann-related Interaction Interface Pymol