Domain ID e3sdmD1

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  • A: a+b complex topology
  • X: Protein kinase/SAICAR synthase/ATP-grasp
  • H: Protein kinase/SAICAR synthase/ATP-grasp
  • T: Protein kinase
  • F: Pkinase
UID: 001770603
Type: Automatic domain
Parent: e1gz8A1
Range: D:670-990
PDB: 3sdm
PDB Description: SERINE/THREONINE-PROTEIN KINASE/ENDORIBONUCLEASE IRE1
UniProt: P32361
Hsap BLAST neighbor: O75460
Species:

Structure of domain e3sdmD1

Domains in the same chain:

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e3sdmD1 D:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdmD2 D:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain

Domains in the same PDB:

e3sdmA1 A:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdmA2 A:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdmB1 B:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdmB2 B:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdmC1 C:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdmC2 C:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdmD1 D:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdmD2 D:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdmE1 E:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdmE2 E:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdmF1 F:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdmF2 F:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain
e3sdmG1 G:670-990 Protein kinase/SAICAR synthase/ATP-grasp Protein kinase/SAICAR synthase/ATP-grasp Protein kinase
e3sdmG2 G:981-1115 Four-helical up-and-down bundle HEPN Nucleotidyltransferase substrate binding subunit/domain

Structural contacts of domain e3sdmD1 of H-group "Protein kinase/SAICAR synthase/ATP-grasp":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3sdmC1 D:x,y,z->C:X,Y,Z Protein kinase/SAICAR synthase/ATP-grasp Interaction Interface Pymol
e3sdmC2 D:x,y,z->C:X,Y,Z HEPN Interaction Interface Pymol
e3sdmB1 D:x,y,z->B:X,Y,Z Protein kinase/SAICAR synthase/ATP-grasp Interaction Interface Pymol
e3sdmB2 D:x,y,z->B:X,Y,Z HEPN Interaction Interface Pymol
e3sdmE1 D:X,Y,Z->E:x,y,z Protein kinase/SAICAR synthase/ATP-grasp Interaction Interface Pymol
e3sdmA1 D:x,y,z->A:X,Y,Z Protein kinase/SAICAR synthase/ATP-grasp Interaction Interface Pymol