Domain ID e3sdxC2

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  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_I_3
UID: 000430377
Type: Automatic domain
Parent: e1lqvA1
Range: C:6-183
Ligands: GCY
PDB: 3sdx
PDB Description: ANTIGEN-PRESENTING GLYCOPROTEIN CD1D
UniProt: P15813
Hsap BLAST neighbor: P15813
Species: Homo sapiens

Structure of domain e3sdxC2

Domains in the same chain:

e3sdxC2 C:6-183 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3sdxC1 C:184-277 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3sdxA2 A:6-183 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3sdxA1 A:184-280 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sdxB1 B:1-97 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sdxC2 C:6-183 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3sdxC1 C:184-277 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sdxD1 D:1-97 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sdxE4 E:1-119 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sdxE3 E:120-203 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sdxF1 F:2-120 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sdxF2 F:121-247 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sdxG1 G:1-114 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sdxG2 G:115-203 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sdxH4 H:1-121 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sdxH3 H:122-247 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3sdxC2 of H-group "MHC antigen-recognition domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3sdxD1 C:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3sdxG1 C:X,Y,Z->G:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3sdxA2 C:x,y,z->A:-X+1/2,Y-1/2,-Z+1 MHC antigen-recognition domain Interaction Interface Pymol
e3sdxH4 C:X,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3sdxA2 C:x,y,z->A:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e3sdxF1 C:X,Y,Z->F:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3sdxB1 C:x,y,z->B:-X+1/2,Y-1/2,-Z+1 Immunoglobulin-related Interaction Interface Pymol