ECOD: domain e3se6B2

Domain ID e3se6B2

A: mixed a+b and a/b
X: Zincin-like
H: Metalloproteases ("zincins") catalytic domain
T: Metalloproteases ("zincins") catalytic domain
F: Peptidase_M1

UID:	001711399
Type:	Automatic domain
Parent:	e1z5hA2
Range:	B:268-502,B:532-535
Ligands:	LYS MES NAG ZN
PDB:	3se6
PDB Description:	Endoplasmic reticulum aminopeptidase 2
UniProt:	Q6P179
Hsap BLAST neighbor:	Q6P179
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3se6B2

Domains in the same chain:

Download Pymol

e3se6B1	B:55-267	Baculovirus p35 protein-related	Baculovirus p35 protein-related	Baculovirus p35 protein-related
e3se6B2	B:268-502,B:532-535	Zincin-like	Metalloproteases ("zincins") catalytic domain	Metalloproteases ("zincins") catalytic domain
e3se6B4	B:546-637	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3se6B3	B:638-961	Repetitive alpha hairpins	ARM repeat	ARM repeat

Domains in the same PDB:

e3se6A1	A:54-270	Baculovirus p35 protein-related	Baculovirus p35 protein-related	Baculovirus p35 protein-related
e3se6A4	A:271-502,A:528-546	Zincin-like	Metalloproteases ("zincins") catalytic domain	Metalloproteases ("zincins") catalytic domain
e3se6A3	A:547-637	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3se6A2	A:638-961	Repetitive alpha hairpins	ARM repeat	ARM repeat
e3se6B1	B:55-267	Baculovirus p35 protein-related	Baculovirus p35 protein-related	Baculovirus p35 protein-related
e3se6B2	B:268-502,B:532-535	Zincin-like	Metalloproteases ("zincins") catalytic domain	Metalloproteases ("zincins") catalytic domain
e3se6B4	B:546-637	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3se6B3	B:638-961	Repetitive alpha hairpins	ARM repeat	ARM repeat

Structural contacts of domain e3se6B2 of H-group "Metalloproteases ("zincins") catalytic domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3se6A1	B:x,y,z->A:X,Y,Z	Baculovirus p35 protein-related	Interaction Interface Pymol