ECOD: domain e3sefA1

Domain ID e3sefA1

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: NAD(P)-binding Rossmann-fold domains
F: Shikimate_DH,SDH_C

UID:	000144010
Type:	Automatic domain
Parent:	e1nvtA1
Range:	A:106-276
Ligands:	NDP
PDB:	3sef
PDB Description:	Shikimate 5-dehydrogenase
UniProt:	Q9KVT3
Species:

Domain
In chain context
In PDB context

Structure of domain e3sefA1

Domains in the same chain:

Download Pymol

e3sefA2	A:5-105	Flavodoxin-like	Class I glutamine amidotransferase-like	Aminoacid dehydrogenase-like, N-terminal domain
e3sefA1	A:106-276	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains

Domains in the same PDB:

e3sefA2	A:5-105	Flavodoxin-like	Class I glutamine amidotransferase-like	Aminoacid dehydrogenase-like, N-terminal domain
e3sefA1	A:106-276	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e3sefB2	B:5-105	Flavodoxin-like	Class I glutamine amidotransferase-like	Aminoacid dehydrogenase-like, N-terminal domain
e3sefB1	B:106-276	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e3sefC2	C:5-105	Flavodoxin-like	Class I glutamine amidotransferase-like	Aminoacid dehydrogenase-like, N-terminal domain
e3sefC1	C:106-275	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e3sefD2	D:5-105	Flavodoxin-like	Class I glutamine amidotransferase-like	Aminoacid dehydrogenase-like, N-terminal domain
e3sefD1	D:106-276	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains

Structural contacts of domain e3sefA1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3sefD2	A:X,Y,Z->D:x,y,z	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e3sefC1	A:x,y,z->C:-X,Y-1/2,-Z	Rossmann-related	Interaction Interface Pymol
e3sefC2	A:x,y,z->C:-X,Y-1/2,-Z	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e3sefB2	A:X-1,Y,Z->B:x,y,z	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e3sefB1	A:X-1,Y,Z->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e3sefD1	A:-X,Y-1/2,-Z+1->D:x,y,z	Rossmann-related	Interaction Interface Pymol
e3sefB1	A:X,Y,Z->B:x,y,z	Rossmann-related	Interaction Interface Pymol
e3sefC1	A:X-1,Y,Z-1->C:x,y,z	Rossmann-related	Interaction Interface Pymol
e3sefD1	A:x,y,z->D:X,Y,Z-1	Rossmann-related	Interaction Interface Pymol
e3sefB2	A:x,y,z->B:-X,Y-1/2,-Z	Class I glutamine amidotransferase-like	Interaction Interface Pymol