ECOD: domain e3seoB1

Domain ID e3seoB1

A: alpha complex topology
X: VopL dimerization domain
H: VopL dimerization domain
T: VopL dimerization domain
F: VCD

UID:	000428210
Type:	Automatic domain
Parent:	e3rylA1
Range:	B:1-240
Ligands:	CL
PDB:	3seo
PDB Description:	VopL C terminal domain protein
UniProt:	Q87GE5
Species:	Vibrio parahaemolyticus

Domains in the same chain:

Download Pymol

e3seoB1	B:1-240	VopL dimerization domain	VopL dimerization domain	VopL dimerization domain

Domains in the same PDB:

e3seoA1	A:2-240	VopL dimerization domain	VopL dimerization domain	VopL dimerization domain
e3seoB1	B:1-240	VopL dimerization domain	VopL dimerization domain	VopL dimerization domain

Structural contacts of domain e3seoB1 of H-group "VopL dimerization domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3seoA1	B:x,y,z->A:X,Y,Z	VopL dimerization domain	Interaction Interface Pymol
e3seoA1	B:x,y,z->A:-X,Y-1/2,-Z+1/2	VopL dimerization domain	Interaction Interface Pymol
e3seoA1	B:x,y,z->A:X-1,Y,Z	VopL dimerization domain	Interaction Interface Pymol
e3seoA1	B:x,y,z->A:X-1/2,-Y+1/2,-Z	VopL dimerization domain	Interaction Interface Pymol
e3seoB1	B:x,y,z->B:-X-1/2,-Y,Z-1/2	VopL dimerization domain	Interaction Interface Pymol
e3seoB1	B:-X-1/2,-Y,Z-1/2->B:x,y,z	VopL dimerization domain	Interaction Interface Pymol
e3seoA1	B:-X-1/2,-Y,Z-1/2->A:x,y,z	VopL dimerization domain	Interaction Interface Pymol
e3seoA1	B:x,y,z->A:X-3/2,-Y+1/2,-Z+1	VopL dimerization domain	Interaction Interface Pymol
e3seoA1	B:x,y,z->A:X-1/2,-Y+1/2,-Z+1	VopL dimerization domain	Interaction Interface Pymol
e3seoA1	B:X-1/2,-Y+1/2,-Z->A:x,y,z	VopL dimerization domain	Interaction Interface Pymol
e3seoB1	B:x,y,z->B:X-1,Y,Z	VopL dimerization domain	Interaction Interface Pymol
e3seoB1	B:X-1,Y,Z->B:x,y,z	VopL dimerization domain	Interaction Interface Pymol
e3seoB1	B:x,y,z->B:X-1/2,-Y+1/2,-Z	VopL dimerization domain	Interaction Interface Pymol
e3seoB1	B:X-1/2,-Y+1/2,-Z->B:x,y,z	VopL dimerization domain	Interaction Interface Pymol