Domain ID e3si6A7

Download files:
  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: DNA_pol_B
UID: 001256587
Type: Automatic domain
Parent: e1tgoA4
Range: A:376-468,A:575-732
Ligands: DUP MG
PDB: 3si6
PDB Description: DNA POLYMERASE
UniProt: Q38087
Species: Enterobacteria phage RB69

Structure of domain e3si6A7

Structural contacts of domain e3si6A7 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3si6A4 A:-X,Y-1/2,-Z+1/2->A:x,y,z Ribonuclease H-like Interaction Interface Pymol
e3si6A6 A:x,y,z->A:X-1/2,-Y+1/2,-Z "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e3si6A5 A:X-1/2,-Y+1/2,-Z->A:x,y,z "thumb" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e3si6A4 A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 Ribonuclease H-like Interaction Interface Pymol
e3si6A5 A:x,y,z->A:-X-1/2,-Y+1,Z-1/2 "thumb" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol