ECOD: domain e3sivD1

Domain ID e3sivD1

A: a+b three layers
X: Bacillus chorismate mutase-like
H: L30e-like
T: L30e-like
F: Ribosomal_L7Ae

UID:	000426838
Type:	Automatic domain
Parent:	e1xbiA1
Range:	D:4-128
PDB:	3siv
PDB Description:	NHP2-like protein 1
UniProt:	P55769
Hsap BLAST neighbor:	P55769
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3sivD1

Domains in the same chain:

Download Pymol

e3sivD1	D:4-128	Bacillus chorismate mutase-like	L30e-like	L30e-like

Domains in the same PDB:

e3sivA1	A:1-128	Bacillus chorismate mutase-like	L30e-like	L30e-like
e3sivB2	B:85-216	Nop N-terminal domain	Nop N-terminal domain	Nop N-terminal domain
e3sivB1	B:217-332	HhH/H2TH	SAM/DNA-glycosylase	Nop C-terminal domain
e3sivD1	D:4-128	Bacillus chorismate mutase-like	L30e-like	L30e-like
e3sivE1	E:86-216	Nop N-terminal domain	Nop N-terminal domain	Nop N-terminal domain
e3sivE2	E:217-332	HhH/H2TH	SAM/DNA-glycosylase	Nop C-terminal domain
e3sivG1	G:1-128	Bacillus chorismate mutase-like	L30e-like	L30e-like
e3sivH1	H:86-216	Nop N-terminal domain	Nop N-terminal domain	Nop N-terminal domain
e3sivH2	H:217-332	HhH/H2TH	SAM/DNA-glycosylase	Nop C-terminal domain
e3sivJ1	J:3-128	Bacillus chorismate mutase-like	L30e-like	L30e-like
e3sivK2	K:86-216	Nop N-terminal domain	Nop N-terminal domain	Nop N-terminal domain
e3sivK1	K:217-332	HhH/H2TH	SAM/DNA-glycosylase	Nop C-terminal domain

Structural contacts of domain e3sivD1 of H-group "L30e-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3sivE2	D:X,Y,Z->E:x,y,z	SAM/DNA-glycosylase	Interaction Interface Pymol