Domain ID e3skjM2

Download files:
  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000428244
Type: Automatic domain
Parent: e1mjuL2
Range: M:109-214
PDB: 3skj
PDB Description: Antibody, light chain
Hsap BLAST neighbor: P01834
Species: Homo sapiens

Structure of domain e3skjM2

Domains in the same chain:

Download Pymol

e3skjM1 M:1-108 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3skjM2 M:109-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3skjE1 E:1-176 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3skjF2 F:28-96,F:121-142,F:163-170 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3skjH1 H:1-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3skjH2 H:114-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3skjI1 I:1-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3skjI2 I:114-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3skjL1 L:1-108 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3skjL2 L:109-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3skjM1 M:1-108 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3skjM2 M:109-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3skjM2 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3skjI2 M:x,y,z->I:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3skjL1 M:x,y,z->L:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3skjL2 M:x,y,z->L:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3skjF2 M:x,y,z->F:X-1/2,Y-1/2,Z Galactose-binding domain-like Interaction Interface Pymol