Domain ID e3sldD1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: Calici_coat_C
UID: 001696507
Type: Automatic domain
Parent: e3lq6A1
Range: D:225-531
PDB: 3sld
PDB Description: Capsid
UniProt: Q5EGK8
Species:

Structure of domain e3sldD1

Domains in the same chain:

e3sldD1 D:225-531 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)

Domains in the same PDB:

e3sldA1 A:223-531 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3sldB1 B:224-531 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3sldC1 C:221-531 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3sldD1 D:225-531 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3sldE1 E:222-530 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3sldF1 F:224-531 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3sldG1 G:224-531 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3sldH1 H:221-531 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3sldI1 I:221-530 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3sldJ1 J:225-531 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)

Structural contacts of domain e3sldD1 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3sldF1 D:X,Y,Z->F:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3sldA1 D:x,y,z->A:-X+1,Y,-Z-1/2 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3sldA1 D:x,y,z->A:X,Y,Z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3sldH1 D:X,Y,Z->H:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3sldD1 D:x,y,z->D:-X+1,Y,-Z-3/2 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3sldD1 D:-X+1,Y,-Z-3/2->D:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3sldD1 D:x,y,z->D:-X+1,Y,-Z-1/2 Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3sldD1 D:-X+1,Y,-Z-1/2->D:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol