Domain ID e3sm5L2

Download files:
  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000144213
Type: Automatic domain
Parent: e1l6xA1
Range: L:110-211
Ligands: SO4
PDB: 3sm5
PDB Description:
Hsap BLAST neighbor: P0DOY2
Species: Homo sapiens

Structure of domain e3sm5L2

Domains in the same chain:

e3sm5L1 L:2-109 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sm5L2 L:110-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3sm5A1 A:4-326 jelly-roll Viral protein domain Viral protein domain
e3sm5C1 C:4-326 jelly-roll Viral protein domain Viral protein domain
e3sm5E1 E:4-326 jelly-roll Viral protein domain Viral protein domain
e3sm5H1 H:1-126 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sm5H2 H:127-227 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sm5I1 I:1-126 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sm5I2 I:127-227 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sm5J1 J:1-126 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sm5J2 J:127-227 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sm5L1 L:2-109 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sm5L2 L:110-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sm5M1 M:2-109 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sm5M2 M:110-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sm5N1 N:2-109 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3sm5N2 N:110-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3sm5L2 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3sm5H2 L:x,y,z->H:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3sm5I2 L:x,y,z->I:X,-Y,-Z+1/2 Immunoglobulin-related Interaction Interface Pymol