Domain ID e3somB1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: FMN-dependent nitroreductase-like
  • T: FMN-dependent nitroreductase-like
  • F: MMACHC
UID: 000425124
Type: Automatic domain
Parent: e3sbyA1
Range: B:3-230
Ligands: 5AD B12 FLC
PDB: 3som
PDB Description: Methylmalonic aciduria and homocystinuria type C protein
UniProt: Q9Y4U1
Hsap BLAST neighbor: Q9Y4U1
Species: Homo sapiens

Structure of domain e3somB1

Domains in the same chain:

e3somB1 B:3-230 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like

Domains in the same PDB:

e3somA1 A:4-230 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somB1 B:3-230 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somC1 C:4-231 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somD1 D:2-230 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somE1 E:4-233 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somF1 F:3-230 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somG1 G:3-230 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somH1 H:4-230 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somI1 I:3-230 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somJ1 J:4-230 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somK1 K:4-230 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somL1 L:3-233 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somM1 M:2-232 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somN1 N:4-235 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somO1 O:4-231 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like
e3somP1 P:2-231 Alpha-beta plaits FMN-dependent nitroreductase-like FMN-dependent nitroreductase-like

Structural contacts of domain e3somB1 of H-group "FMN-dependent nitroreductase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3somA1 B:x,y,z->A:X,Y,Z FMN-dependent nitroreductase-like Interaction Interface Pymol
e3somO1 B:X-1,Y,Z+1->O:x,y,z FMN-dependent nitroreductase-like Interaction Interface Pymol
e3somD1 B:X,Y,Z->D:x,y,z FMN-dependent nitroreductase-like Interaction Interface Pymol
e3somC1 B:X,Y,Z->C:x,y,z FMN-dependent nitroreductase-like Interaction Interface Pymol
e3somA1 B:X-1,Y,Z->A:x,y,z FMN-dependent nitroreductase-like Interaction Interface Pymol