| UID: | 000185539 |
|---|---|
| Type: | Manual and representative domain |
| Range: | B:235-319 |
| Ligands: | SO4 |
| PDB: | 3soo |
| PDB Description: | LINE-1 type transposase domain-containing protein 1 |
| In assembly with: | e3sooC1 |
| UniProt: | Q5T7N2 |
| Hsap BLAST neighbor: | Q5T7N2 |
| Species: | Homo sapiens |
Structure of domain e3sooB1 in assembly with e3sooC1
Domains in the same chain:
| e3sooB1 | B:235-319 | dsRBD-like | C-terminal domain in LINE-1 ORF1p | C-terminal domain in LINE-1 ORF1p |
Domains in the same PDB:
Structural contacts of domain e3sooB1 of H-group "C-terminal domain in LINE-1 ORF1p":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3sooC1 | B:X,Y,Z->C:x,y,z | C-terminal domain in LINE-1 ORF1p | Interaction Interface Pymol |
| e3sooA1 | B:x,y,z->A:X,Y,Z | C-terminal domain in LINE-1 ORF1p | Interaction Interface Pymol |
| e3sooA1 | B:x,y,z->A:-Y,-X,-Z+1/6 | C-terminal domain in LINE-1 ORF1p | Interaction Interface Pymol |
| e3sooC1 | B:-Y+1,-X+1,-Z+1/6->C:x,y,z | C-terminal domain in LINE-1 ORF1p | Interaction Interface Pymol |
| e3sooA1 | B:x,y,z->A:X-Y+1,X+1,Z-1/6 | C-terminal domain in LINE-1 ORF1p | Interaction Interface Pymol |
| e3sooB1 | B:x,y,z->B:-Y+1,-X+1,-Z+1/6 | C-terminal domain in LINE-1 ORF1p | Interaction Interface Pymol |
| e3sooB1 | B:-Y+1,-X+1,-Z+1/6->B:x,y,z | C-terminal domain in LINE-1 ORF1p | Interaction Interface Pymol |
