Domain ID e3spzA4

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: DNA_pol_B_exo1
UID: 000430956
Type: Automatic domain
Parent: e1ih7A4
Range: A:1-375
Ligands: CA
PDB: 3spz
PDB Description: DNA polymerase
UniProt: Q38087
Species: Enterobacteria phage RB69

Structure of domain e3spzA4

Structural contacts of domain e3spzA4 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3spzA7 A:x,y,z->A:-X,Y-1/2,-Z+1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3spzA6 A:-X,Y-1/2,-Z+1/2->A:x,y,z "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e3spzA5 A:-X,Y-1/2,-Z+1/2->A:x,y,z "thumb" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e3spzA7 A:x,y,z->A:-X-1/2,-Y,Z-1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3spzA5 A:x,y,z->A:X-1/2,-Y-1/2,-Z "thumb" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e3spzA5 A:x,y,z->A:X-1,Y,Z "thumb" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol