Domain ID e3sqgD2

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Methyl-coenzyme M reductase subunits
  • T: Methyl-coenzyme M reductase subunits
  • F: MCR_alpha_N
UID: 000434528
Type: Automatic domain
Parent: e1hbnA2
Range: D:2-283
Ligands: 1PE CA M43 P6G PGE SO4 TP7
PDB: 3sqg
PDB Description: Methyl coenzyme M reductase, alpha subunit
UniProt: D1JBK4
Species: uncultured archaeon

Structure of domain e3sqgD2

Domains in the same chain:

e3sqgD2 D:2-283 Alpha-beta plaits Methyl-coenzyme M reductase subunits Methyl-coenzyme M reductase subunits
e3sqgD1 D:284-579 Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C

Domains in the same PDB:

e3sqgA1 A:2-283 Alpha-beta plaits Methyl-coenzyme M reductase subunits Methyl-coenzyme M reductase subunits
e3sqgA2 A:284-579 Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C
e3sqgB2 B:3-183 Alpha-beta plaits Methyl-coenzyme M reductase subunits Methyl-coenzyme M reductase subunits
e3sqgB1 B:184-433 Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C
e3sqgC1 C:2-280 Alpha-beta plaits Methyl-coenzyme M reductase subunits Methyl-coenzyme M reductase subunits
e3sqgD2 D:2-283 Alpha-beta plaits Methyl-coenzyme M reductase subunits Methyl-coenzyme M reductase subunits
e3sqgD1 D:284-579 Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C
e3sqgE2 E:3-183 Alpha-beta plaits Methyl-coenzyme M reductase subunits Methyl-coenzyme M reductase subunits
e3sqgE1 E:184-433 Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C
e3sqgF1 F:2-280 Alpha-beta plaits Methyl-coenzyme M reductase subunits Methyl-coenzyme M reductase subunits
e3sqgG2 G:2-283 Alpha-beta plaits Methyl-coenzyme M reductase subunits Methyl-coenzyme M reductase subunits
e3sqgG1 G:284-579 Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C
e3sqgH2 H:3-183 Alpha-beta plaits Methyl-coenzyme M reductase subunits Methyl-coenzyme M reductase subunits
e3sqgH1 H:184-433 Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C Methyl-coenzyme M reductase alpha and beta chain-C
e3sqgI1 I:2-280 Alpha-beta plaits Methyl-coenzyme M reductase subunits Methyl-coenzyme M reductase subunits

Structural contacts of domain e3sqgD2 of H-group "Methyl-coenzyme M reductase subunits":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3sqgA1 D:x,y,z->A:X,Y,Z Methyl-coenzyme M reductase subunits Interaction Interface Pymol
e3sqgA2 D:x,y,z->A:X,Y,Z Methyl-coenzyme M reductase alpha and beta chain-C Interaction Interface Pymol
e3sqgF1 D:X,Y,Z->F:x,y,z Methyl-coenzyme M reductase subunits Interaction Interface Pymol
e3sqgB2 D:X,Y,Z->B:x,y,z Methyl-coenzyme M reductase subunits Interaction Interface Pymol
e3sqgB1 D:X,Y,Z->B:x,y,z Methyl-coenzyme M reductase alpha and beta chain-C Interaction Interface Pymol
e3sqgG1 D:X,Y,Z->G:x,y,z Methyl-coenzyme M reductase alpha and beta chain-C Interaction Interface Pymol
e3sqgG2 D:X,Y,Z->G:x,y,z Methyl-coenzyme M reductase subunits Interaction Interface Pymol
e3sqgE2 D:X,Y,Z->E:x,y,z Methyl-coenzyme M reductase subunits Interaction Interface Pymol
e3sqgC1 D:X,Y,Z->C:x,y,z Methyl-coenzyme M reductase subunits Interaction Interface Pymol
e3sqgG1 D:-X+1,Y,-Z+1/2->G:x,y,z Methyl-coenzyme M reductase alpha and beta chain-C Interaction Interface Pymol
e3sqgG2 D:-X+1,Y,-Z+1/2->G:x,y,z Methyl-coenzyme M reductase subunits Interaction Interface Pymol
e3sqgA1 D:x,y,z->A:-X+1,Y,-Z+1/2 Methyl-coenzyme M reductase subunits Interaction Interface Pymol
e3sqgD1 D:x,y,z->D:-X+1,Y,-Z+1/2 Methyl-coenzyme M reductase alpha and beta chain-C Interaction Interface Pymol
e3sqgD1 D:-X+1,Y,-Z+1/2->D:x,y,z Methyl-coenzyme M reductase alpha and beta chain-C Interaction Interface Pymol
e3sqgI1 D:X,Y,Z->I:x,y,z Methyl-coenzyme M reductase subunits Interaction Interface Pymol