Domain ID e3t0eB1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000216128
Type: Automatic domain
Parent: e1k5nB1
Range: B:123-218
PDB: 3t0e
PDB Description: HLA class II histocompatibility antigen, DRB1-4 beta chain
UniProt: P13760
Hsap BLAST neighbor: P79483
Species: Homo sapiens

Structure of domain e3t0eB1

Domains in the same chain:

e3t0eB2 B:1-117 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3t0eB1 B:123-218 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3t0eA2 A:4-78 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3t0eA1 A:79-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3t0eB2 B:1-117 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3t0eB1 B:123-218 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3t0eC1 C:1-110 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3t0eC2 C:111-198 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3t0eD4 D:1-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3t0eD3 D:119-245 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3t0eE2 E:1-97 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3t0eE3 E:98-181 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3t0eE9 E:182-290 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3t0eE10 E:291-365 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3t0eB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3t0eA2 B:x,y,z->A:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e3t0eA1 B:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3t0eE2 B:X,Y,Z->E:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3t0eE9 B:Y,X,-Z->E:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3t0eC2 B:x,y,z->C:-Y+1/2,X+1/2,Z-1/4 Immunoglobulin-related Interaction Interface Pymol