| UID: | 001511059 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3wf2A1 |
| Range: | D:29-367 |
| Ligands: | CL DGJ EDO NAG SO4 |
| PDB: | 3thd |
| PDB Description: | BETA-GALACTOSIDASE |
| UniProt: | P16278 |
| Hsap BLAST neighbor: | P16278 |
| Species: | Homo sapiens |
Structure of domain e3thdD1
Domains in the same chain:
| e3thdD1 | D:29-367 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e3thdD3 | D:368-395,D:545-647 | jelly-roll | Concanavalin A-like | Galactose-binding domain-like |
| e3thdD2 | D:396-530 | jelly-roll | Concanavalin A-like | Galactose-binding domain-like |
Domains in the same PDB:
| e3thdA3 | A:29-367 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e3thdA1 | A:368-395,A:545-647 | jelly-roll | Concanavalin A-like | Galactose-binding domain-like |
| e3thdA2 | A:396-530 | jelly-roll | Concanavalin A-like | Galactose-binding domain-like |
| e3thdB2 | B:29-367 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e3thdB1 | B:368-395,B:545-647 | jelly-roll | Concanavalin A-like | Galactose-binding domain-like |
| e3thdB3 | B:396-530 | jelly-roll | Concanavalin A-like | Galactose-binding domain-like |
| e3thdC7 | C:29-372 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e3thdC8 | C:373-519 | jelly-roll | Concanavalin A-like | Galactose-binding domain-like |
| e3thdC9 | C:520-647 | jelly-roll | Galactose-binding domain-like | Galactose-binding domain-like |
| e3thdD1 | D:29-367 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
| e3thdD3 | D:368-395,D:545-647 | jelly-roll | Concanavalin A-like | Galactose-binding domain-like |
| e3thdD2 | D:396-530 | jelly-roll | Concanavalin A-like | Galactose-binding domain-like |
Structural contacts of domain e3thdD1 of H-group "TIM barrels":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3thdA1 | D:x,y,z->A:X,Y,Z | Concanavalin A-like | Interaction Interface Pymol |
| e3thdB3 | D:x,y,z->B:X,Y,Z | Concanavalin A-like | Interaction Interface Pymol |
| e3thdB1 | D:x,y,z->B:X,Y,Z | Concanavalin A-like | Interaction Interface Pymol |
| e3thdC7 | D:x,y,z->C:-X+1,Y-1/2,-Z+1 | TIM barrels | Interaction Interface Pymol |
| e3thdC7 | D:x,y,z->C:-X,Y-1/2,-Z+1 | TIM barrels | Interaction Interface Pymol |
| e3thdC7 | D:x,y,z->C:X,Y,Z | TIM barrels | Interaction Interface Pymol |
