Domain ID e3thoA1

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: AAA_23
UID: 001290125
Type: Automatic domain
Parent: e5da9A1
Range: A:-1-850
Ligands: ADP MG PO4 SO4
PDB: 3tho
PDB Description: Probable DNA double-strand break repair Rad50 ATPase
UniProt: Q9X1X1
Species: Thermotoga maritima

Structure of domain e3thoA1

Structural contacts of domain e3thoA1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3thoB3 A:X,Y,Z->B:x,y,z Mre11 nuclease C-terminal domain Interaction Interface Pymol
e3thoB2 A:X,Y,Z->B:x,y,z Metallo-dependent phosphatases Interaction Interface Pymol
e3thoB1 A:X,Y,Z->B:x,y,z Rad50-binding domain of Mre11 Interaction Interface Pymol
e3thoA1 A:x,y,z->A:X-Y,-Y,-Z+1/3 P-loop domains-related Interaction Interface Pymol
e3thoA1 A:X-Y,-Y,-Z+1/3->A:x,y,z P-loop domains-related Interaction Interface Pymol
e3thoB2 A:-Y-1,X-Y,Z-1/3->B:x,y,z Metallo-dependent phosphatases Interaction Interface Pymol
e3thoA1 A:x,y,z->A:Y,X,-Z P-loop domains-related Interaction Interface Pymol
e3thoA1 A:Y,X,-Z->A:x,y,z P-loop domains-related Interaction Interface Pymol
e3thoB3 A:X-Y,-Y,-Z+1/3->B:x,y,z Mre11 nuclease C-terminal domain Interaction Interface Pymol
e3thoB2 A:X-Y,-Y,-Z+1/3->B:x,y,z Metallo-dependent phosphatases Interaction Interface Pymol
e3thoB2 A:x,y,z->B:-X-1,-X+Y-1,-Z-1/3 Metallo-dependent phosphatases Interaction Interface Pymol
e3thoA1 A:x,y,z->A:-Y,X-Y,Z-1/3 P-loop domains-related Interaction Interface Pymol
e3thoA1 A:-Y,X-Y,Z-1/3->A:x,y,z P-loop domains-related Interaction Interface Pymol
e3thoB2 A:Y-1,X,-Z->B:x,y,z Metallo-dependent phosphatases Interaction Interface Pymol