ECOD: domain e3tmgD2

Domain ID e3tmgD2

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: OpuAC

UID:	001547801
Type:	Automatic domain
Parent:	e1r9lA3
Range:	D:108-221
Ligands:	BET EDO
PDB:	3tmg
PDB Description:	GLYCINE BETAINE, L-PROLINE ABC TRANSPORTER, GLYCINE/BETAINE/L-PROLINE-BINDING PROTEIN (PROX)
UniProt:	O51169
Species:	Borrelia burgdorferi

Domain
In chain context
In PDB context

Structure of domain e3tmgD2

Domains in the same chain:

Download Pymol

e3tmgD1	D:26-107,D:222-290	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3tmgD2	D:108-221	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e3tmgA2	A:25-107,A:222-290	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3tmgA1	A:108-221	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3tmgB2	B:26-107,B:222-290	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3tmgB1	B:108-221	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3tmgC2	C:26-107,C:222-290	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3tmgC1	C:108-221	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3tmgD1	D:26-107,D:222-290	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3tmgD2	D:108-221	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e3tmgD2 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3tmgC2	D:x,y,z->C:X,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3tmgC1	D:x,y,z->C:X-1,Y,Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3tmgB1	D:X,Y-1,Z->B:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol