| UID: | 000429560 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1r6wA2 |
| Range: | D:133-360 |
| Ligands: | ACT CA P4C |
| PDB: | 3toy |
| PDB Description: | MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME FAMILY PROTEIN |
| UniProt: | A4YVM8 |
| Hsap BLAST neighbor: | Q7L5Y1 |
| Species: | Bradyrhizobium sp. ORS 278 |
Structure of domain e3toyD2
Domains in the same chain:
| e3toyD1 | D:2-132 | Enolase-N/ribosomal protein | Enolase N-terminal domain-like | Enolase N-terminal domain-like |
| e3toyD2 | D:133-360 | TIM beta/alpha-barrel | TIM barrels | TIM barrels |
Domains in the same PDB:
Structural contacts of domain e3toyD2 of H-group "TIM barrels":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3toyD1 | D:x,y,z->D:-X+1,-Y,Z | Enolase N-terminal domain-like | Interaction Interface Pymol |
| e3toyD2 | D:x,y,z->D:-X+1,-Y,Z | TIM barrels | Interaction Interface Pymol |
| e3toyD2 | D:-X+1,-Y,Z->D:x,y,z | TIM barrels | Interaction Interface Pymol |
| e3toyD1 | D:-X+1,-Y,Z->D:x,y,z | Enolase N-terminal domain-like | Interaction Interface Pymol |
| e3toyC2 | D:x,y,z->C:X,Y,Z | TIM barrels | Interaction Interface Pymol |
| e3toyC1 | D:x,y,z->C:X,Y,Z | Enolase N-terminal domain-like | Interaction Interface Pymol |
| e3toyC2 | D:x,y,z->C:-X+1,-Y,Z | TIM barrels | Interaction Interface Pymol |
| e3toyB2 | D:x,y,z->B:X,Y,Z | TIM barrels | Interaction Interface Pymol |
| e3toyB2 | D:x,y,z->B:-X+3/2,Y-1/2,-Z+1 | TIM barrels | Interaction Interface Pymol |
| e3toyB1 | D:x,y,z->B:-X+3/2,Y-1/2,-Z+1 | Enolase N-terminal domain-like | Interaction Interface Pymol |
| e3toyA1 | D:x,y,z->A:X,Y,Z-1 | Enolase N-terminal domain-like | Interaction Interface Pymol |
| e3toyC2 | D:X-1/2,-Y+1/2,-Z+1->C:x,y,z | TIM barrels | Interaction Interface Pymol |
| e3toyA1 | D:x,y,z->A:-X+1,-Y,Z-1 | Enolase N-terminal domain-like | Interaction Interface Pymol |
| e3toyC1 | D:x,y,z->C:-X+3/2,Y-1/2,-Z+1 | Enolase N-terminal domain-like | Interaction Interface Pymol |
