Domain ID e3trzC4

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: CSD
UID: 001245185
Type: Automatic domain
Parent: e1c9oA1
Range: C:35-119
PDB: 3trz
PDB Description: Protein lin-28 homolog A
UniProt: Q8K3Y3
Hsap BLAST neighbor: Q9H9Z2
Species: Mus musculus

Structure of domain e3trzC4

Domains in the same chain:

e3trzC4 C:35-119 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3trzC3 C:120-157 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger
e3trzC2 C:158-179 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger

Domains in the same PDB:

e3trzA4 A:35-119 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3trzA3 A:120-157 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger
e3trzA2 A:158-179 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger
e3trzB4 B:35-119 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3trzB3 B:120-157 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger
e3trzB2 B:158-179 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger
e3trzC4 C:35-119 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3trzC3 C:120-157 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger
e3trzC2 C:158-179 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger
e3trzD4 D:35-119 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3trzD3 D:120-157 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger
e3trzD2 D:158-179 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger
e3trzE4 E:35-119 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3trzE3 E:120-157 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger
e3trzE2 E:158-179 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger
e3trzF4 F:35-119 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3trzF3 F:120-157 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger
e3trzF2 F:158-179 CCHC-type 1 zinc finger CCHC-type 1 zinc finger CCHC-type 1 zinc finger

Structural contacts of domain e3trzC4 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3trzF3 C:X,Y,Z->F:x,y,z CCHC-type 1 zinc finger Interaction Interface Pymol
e3trzF4 C:X,Y,Z->F:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol
e3trzA2 C:x,y,z->A:Y,X,-Z CCHC-type 1 zinc finger Interaction Interface Pymol
e3trzE4 C:x,y,z->E:-X+1/2,Y-1/2,-Z+3/4 Nucleic acid-binding proteins Interaction Interface Pymol