Domain ID e3tvmE2

Download files:
  • A: a+b two layers
  • X: MHC antigen-recognition domain
  • H: MHC antigen-recognition domain
  • T: MHC antigen-recognition domain
  • F: MHC_I_3
UID: 001410886
Type: Automatic domain
Parent: e1lqvA1
Range: E:7-185
Ligands: 07P GOL NAG
PDB: 3tvm
PDB Description: Antigen-presenting glycoprotein CD1d1
UniProt: P11609
Hsap BLAST neighbor: P15813
Species: Mus musculus

Structure of domain e3tvmE2

Domains in the same chain:

e3tvmE2 E:7-185 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3tvmE1 E:186-249 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e3tvmA3 A:6-185 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3tvmA4 A:186-279 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3tvmB1 B:1-99 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3tvmC1 C:1-117 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3tvmC2 C:118-207 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3tvmD4 D:2-115 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3tvmD3 D:116-240 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3tvmE2 E:7-185 MHC antigen-recognition domain MHC antigen-recognition domain MHC antigen-recognition domain
e3tvmE1 E:186-249 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3tvmF1 F:1-99 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3tvmG1 G:-1-115 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3tvmG2 G:116-204 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3tvmH4 H:1-115 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3tvmH3 H:116-240 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3tvmE2 of H-group "MHC antigen-recognition domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3tvmF1 E:x,y,z->F:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3tvmG1 E:X,Y,Z->G:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3tvmD3 E:-X+1,Y-1/2,-Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3tvmH4 E:X,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3tvmA3 E:x,y,z->A:X,Y,Z MHC antigen-recognition domain Interaction Interface Pymol
e3tvmB1 E:x,y,z->B:X,Y,Z Immunoglobulin-related Interaction Interface Pymol