Domain ID e3u2sC2

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  • A: beta barrels
  • X: V1/V2 domain in HIV gp120
  • H: V1/V2 domain in HIV gp120
  • T: V1/V2 domain in HIV gp120
  • F: Unmapped domains
UID: 001822814
Type: Automatic domain
Parent: e3u2sG2
Range: C:128-194
Ligands: NAG
PDB: 3u2s
PDB Description: Envelope glycoprotein gp120
UniProt: Q6TCP8
Species: Human immunodeficiency virus 1

Structure of domain e3u2sC2

Domains in the same chain:

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e3u2sC1 C:119-127,C:195-239 beta-Grasp Immunoglobulin-binding domains Immunoglobulin-binding domains
e3u2sC2 C:128-194 V1/V2 domain in HIV gp120 V1/V2 domain in HIV gp120 V1/V2 domain in HIV gp120

Domains in the same PDB:

e3u2sA1 A:2-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u2sA2 A:114-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u2sB1 B:2-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u2sB2 B:108-208 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u2sC1 C:119-127,C:195-239 beta-Grasp Immunoglobulin-binding domains Immunoglobulin-binding domains
e3u2sC2 C:128-194 V1/V2 domain in HIV gp120 V1/V2 domain in HIV gp120 V1/V2 domain in HIV gp120
e3u2sG1 G:120-127,G:195-240 beta-Grasp Immunoglobulin-binding domains Immunoglobulin-binding domains
e3u2sG2 G:128-194 V1/V2 domain in HIV gp120 V1/V2 domain in HIV gp120 V1/V2 domain in HIV gp120
e3u2sH1 H:2-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u2sH2 H:114-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u2sL1 L:2-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u2sL2 L:108-208 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3u2sC2 of H-group "V1/V2 domain in HIV gp120":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3u2sA1 C:x,y,z->A:X,Y,Z Immunoglobulin-related Interaction Interface Pymol