Domain ID e3u30D5

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  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Ubiquitin-like
  • F: ubiquitin
UID: 001159264
Type: Automatic domain
Parent: e2zeqA1
Range: D:2-73
PDB: 3u30
PDB Description: linear di-ubiquitin
UniProt: P0CG48
Hsap BLAST neighbor: P62979
Species: Homo sapiens

Structure of domain e3u30D5

Domains in the same chain:

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e3u30D5 D:2-73 beta-Grasp Ubiquitin-related Ubiquitin-like
e3u30D6 D:74-146 beta-Grasp Ubiquitin-related Ubiquitin-like

Domains in the same PDB:

e3u30A2 A:-1-76 beta-Grasp Ubiquitin-related Ubiquitin-like
e3u30A1 A:74-151 beta-Grasp Ubiquitin-related Ubiquitin-like
e3u30B1 B:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u30B2 B:108-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u30C1 C:1-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u30C2 C:114-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u30D5 D:2-73 beta-Grasp Ubiquitin-related Ubiquitin-like
e3u30D6 D:74-146 beta-Grasp Ubiquitin-related Ubiquitin-like
e3u30E1 E:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u30E2 E:108-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u30F1 F:1-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3u30F2 F:114-211 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3u30D5 of H-group "Ubiquitin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3u30F1 D:X,Y,Z->F:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3u30C1 D:X,Y,Z-1->C:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3u30C2 D:X,Y,Z-1->C:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3u30E1 D:X,Y,Z->E:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3u30E2 D:X,Y,Z-1->E:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3u30B1 D:x,y,z->B:X-1,Y+1,Z+1 Immunoglobulin-related Interaction Interface Pymol