Domain ID e3u5mF2

Download files:
  • A: few secondary structure elements
  • X: RING/U-box-like
  • H: RING/U-box-like
  • T: FYVE/PHD zinc finger
  • F: PHD
UID: 000967065
Type: Automatic domain
Parent: e1mm2A1
Range: F:881-939
Ligands: CA ZN
PDB: 3u5m
PDB Description: E3 UBIQUITIN-PROTEIN LIGASE TRIM33
UniProt: Q9UPN9
Hsap BLAST neighbor: Q9UPN9
Species: Homo sapiens

Structure of domain e3u5mF2

Domains in the same chain:

e3u5mF2 F:881-939 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3u5mF1 F:940-1058 Bromodomain-like Bromodomain Bromodomain

Domains in the same PDB:

e3u5mA1 A:885-943 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3u5mA2 A:944-1087 Bromodomain-like Bromodomain Bromodomain
e3u5mB7 B:885-961 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3u5mB8 B:962-1087 Bromodomain-like Bromodomain Bromodomain
e3u5mC7 C:885-932 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3u5mC8 C:933-1087 Bromodomain-like Bromodomain Bromodomain
e3u5mD7 D:885-932 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3u5mD8 D:962-1087 Bromodomain-like Bromodomain Bromodomain
e3u5mE5 E:885-932 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3u5mE6 E:933-1087 Bromodomain-like Bromodomain Bromodomain
e3u5mF2 F:881-939 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3u5mF1 F:940-1058 Bromodomain-like Bromodomain Bromodomain
e3u5mG7 G:885-932 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3u5mG8 G:962-1087 Bromodomain-like Bromodomain Bromodomain
e3u5mH2 H:881-939 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3u5mH1 H:940-1058 Bromodomain-like Bromodomain Bromodomain
e3u5mI5 I:886-932 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3u5mI2 I:933-1087 Bromodomain-like Bromodomain Bromodomain
e3u5mJ5 J:885-932 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3u5mJ6 J:933-1087 Bromodomain-like Bromodomain Bromodomain
e3u5mK7 K:885-932 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3u5mK8 K:933-1087 Bromodomain-like Bromodomain Bromodomain
e3u5mL7 L:886-932 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3u5mL8 L:962-1087 Bromodomain-like Bromodomain Bromodomain

Structural contacts of domain e3u5mF2 of H-group "RING/U-box-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3u5mG8 F:X,Y,Z->G:x,y,z Bromodomain Interaction Interface Pymol