ECOD: domain e3u6bA4

Domain ID e3u6bA4

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: GTP_EFTU

UID:	001175342
Type:	Automatic domain
Parent:	e2c78A3
Range:	A:5-201
Ligands:	GDP MG
PDB:	3u6b
PDB Description:	Elongation factor Tu 1
UniProt:	P0CE47
Hsap BLAST neighbor:	P49411
Species:

Domain
In chain context
In PDB context

Structure of domain e3u6bA4

Domains in the same chain:

Download Pymol

e3u6bA4	A:5-201	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3u6bA6	A:202-300	cradle loop barrel	RIFT-related	Alanine racemase-C
e3u6bA2	A:301-393	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Domains in the same PDB:

Structural contacts of domain e3u6bA4 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3u6bA4	A:x,y,z->A:-X-1,Y,-Z+1/2	P-loop domains-related	Interaction Interface Pymol
e3u6bA2	A:x,y,z->A:-X-1,Y,-Z+1/2	RIFT-related	Interaction Interface Pymol
e3u6bA2	A:-X-1,Y,-Z+1/2->A:x,y,z	RIFT-related	Interaction Interface Pymol
e3u6bA4	A:-X-1,Y,-Z+1/2->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e3u6bB7	A:x,y,z->B:X-1/2,Y-1/2,Z	RIFT-related	Interaction Interface Pymol
e3u6bB8	A:x,y,z->B:X-1/2,-Y-1/2,-Z	P-loop domains-related	Interaction Interface Pymol
e3u6bB8	A:-X,Y,-Z+1/2->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e3u6bB7	A:-X,Y,-Z+1/2->B:x,y,z	RIFT-related	Interaction Interface Pymol
e3u6bA6	A:X-1/2,Y+1/2,Z->A:x,y,z	RIFT-related	Interaction Interface Pymol
e3u6bB9	A:X,Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol