ECOD: domain e3uagA2

Domain ID e3uagA2

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Mur_ligase_M

UID:	000103004
Type:	Automatic domain
Parent:	e1j6uA2
Range:	A:94-297
Ligands:	ADP EPE MN UMA
PDB:	3uag
PDB Description:	PROTEIN (UDP-N-ACETYLMURAMOYL-L-ALANINE:D-GLUTAMATE LIGASE)
UniProt:	P14900
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e3uagA2

Domains in the same chain:

Download Pymol

e3uagA1	A:1-93	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e3uagA2	A:94-297	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3uagA3	A:298-437	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Domains in the same PDB:

e3uagA1	A:1-93	Rossmann-like	Rossmann-related	MurCD/PglD N-terminal domain-like
e3uagA2	A:94-297	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3uagA3	A:298-437	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain	MurD-like peptide ligases, peptide-binding domain

Structural contacts of domain e3uagA2 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3uagA2	A:x,y,z->A:-Y,X-1,Z+1/4	P-loop domains-related	Interaction Interface Pymol
e3uagA3	A:x,y,z->A:-Y,X-1,Z+1/4	MurD-like peptide ligases, peptide-binding domain	Interaction Interface Pymol
e3uagA2	A:-Y,X-1,Z+1/4->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e3uagA1	A:x,y,z->A:-Y+1,X-1,Z+1/4	Rossmann-related	Interaction Interface Pymol