ECOD: domain e3ub0D2

Domain ID e3ub0D2

A: beta barrels
X: Coronavirus NSP8-like
H: Coronavirus NSP8-like
T: Coronavirus NSP8-like
F: CoV_NSP8

UID:	001268459
Type:	Automatic domain
Parent:	e2ahmE1
Range:	D:-2-191
PDB:	3ub0
PDB Description:	Non-structural protein 6, nsp6,
UniProt:	Q98VG9
Species:

Domains in the same chain:

Download Pymol

e3ub0D2	D:-2-191	Coronavirus NSP8-like	Coronavirus NSP8-like	Coronavirus NSP8-like

Domains in the same PDB:

Structural contacts of domain e3ub0D2 of H-group "Coronavirus NSP8-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3ub0F2	D:X,Y,Z->F:x,y,z	Coronavirus NSP7-like	Interaction Interface Pymol
e3ub0A1	D:x,y,z->A:X,Y,Z	Coronavirus NSP8-like	Interaction Interface Pymol
e3ub0E2	D:X,Y,Z->E:x,y,z	Coronavirus NSP7-like	Interaction Interface Pymol
e3ub0B1	D:X,Y,Z->B:x,y,z	Coronavirus NSP7-like	Interaction Interface Pymol
e3ub0B1	D:X-1/2,-Y+1/2,-Z+1->B:x,y,z	Coronavirus NSP7-like	Interaction Interface Pymol
e3ub0A1	D:X-1/2,Y-1/2,Z->A:x,y,z	Coronavirus NSP8-like	Interaction Interface Pymol
e3ub0A1	D:x,y,z->A:X,-Y,-Z+1	Coronavirus NSP8-like	Interaction Interface Pymol
e3ub0D2	D:x,y,z->D:X,-Y+1,-Z	Coronavirus NSP8-like	Interaction Interface Pymol
e3ub0D2	D:X,-Y+1,-Z->D:x,y,z	Coronavirus NSP8-like	Interaction Interface Pymol
e3ub0C2	D:X,Y,Z->C:x,y,z	Coronavirus NSP7-like	Interaction Interface Pymol
e3ub0D2	D:x,y,z->D:-X+1,Y,-Z+1/2	Coronavirus NSP8-like	Interaction Interface Pymol
e3ub0D2	D:-X+1,Y,-Z+1/2->D:x,y,z	Coronavirus NSP8-like	Interaction Interface Pymol
e3ub0D2	D:x,y,z->D:X,-Y,-Z+1	Coronavirus NSP8-like	Interaction Interface Pymol
e3ub0D2	D:X,-Y,-Z+1->D:x,y,z	Coronavirus NSP8-like	Interaction Interface Pymol

e3ub0A1	A:-2-192	Coronavirus NSP8-like	Coronavirus NSP8-like	Coronavirus NSP8-like
e3ub0B1	B:2-83	immunoglobulin/albumin-binding domain-like	Coronavirus NSP7-like	Coronavirus NSP7-like
e3ub0C2	C:0-81	immunoglobulin/albumin-binding domain-like	Coronavirus NSP7-like	Coronavirus NSP7-like
e3ub0D2	D:-2-191	Coronavirus NSP8-like	Coronavirus NSP8-like	Coronavirus NSP8-like
e3ub0E2	E:2-82	immunoglobulin/albumin-binding domain-like	Coronavirus NSP7-like	Coronavirus NSP7-like
e3ub0F2	F:0-77	immunoglobulin/albumin-binding domain-like	Coronavirus NSP7-like	Coronavirus NSP7-like