Domain ID e3ubpC1

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  • A: beta sandwiches
  • X: Composite domain of metallo-dependent hydrolases
  • H: Composite domain of metallo-dependent hydrolases
  • T: Composite domain of metallo-dependent hydrolases
  • F: Urease_alpha
UID: 000029127
Type: Automatic domain
Parent: e4ubpC1
Range: C:1-131,C:435-483
PDB: 3ubp
PDB Description: PROTEIN (UREASE ALPHA SUBUNIT)
UniProt: P41020
Species: Sporosarcina pasteurii

Structure of domain e3ubpC1

Structural contacts of domain e3ubpC1 of H-group "Composite domain of metallo-dependent hydrolases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ubpC2 C:x,y,z->C:-Y+1,X-Y+1,Z TIM barrels Interaction Interface Pymol
e3ubpB1 C:x,y,z->B:X,Y,Z Urease, beta-subunit Interaction Interface Pymol
e3ubpA1 C:-Y+1,X-Y+1,Z->A:x,y,z Urease, gamma-subunit Interaction Interface Pymol
e3ubpA1 C:x,y,z->A:X,Y,Z Urease, gamma-subunit Interaction Interface Pymol
e3ubpC2 C:x,y,z->C:X,X-Y+1,-Z+1/2 TIM barrels Interaction Interface Pymol
e3ubpC2 C:X,X-Y+1,-Z+1/2->C:x,y,z TIM barrels Interaction Interface Pymol
e3ubpA1 C:x,y,z->A:X-Y+1,-Y+2,-Z+1 Urease, gamma-subunit Interaction Interface Pymol
e3ubpC1 C:x,y,z->C:-X+Y,Y,-Z+1/2 Composite domain of metallo-dependent hydrolases Interaction Interface Pymol
e3ubpC1 C:-X+Y,Y,-Z+1/2->C:x,y,z Composite domain of metallo-dependent hydrolases Interaction Interface Pymol