ECOD: domain e3udcD4

Domain ID e3udcD4

A: a+b two layers
X: Alpha-beta plaits
H: Mechanosensitive channel protein MscS (YggB), C-terminal domain
T: Mechanosensitive channel protein MscS (YggB), C-terminal domain
F: MS_channel_3rd

UID:	001252019
Type:	Automatic domain
Parent:	e2vv5A3
Range:	D:178-279
PDB:	3udc
PDB Description:	Small-conductance mechanosensitive channel, C-terminal peptide from Small-conductance mechanosensitive channel
UniProt:	Q8R6L9
Species:

Domains in the same chain:

Download Pymol

e3udcD6	D:13-111	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region
e3udcD5	D:112-177	SH3	SH3	SH3
e3udcD4	D:178-279	Alpha-beta plaits	Mechanosensitive channel protein MscS (YggB), C-terminal domain	Mechanosensitive channel protein MscS (YggB), C-terminal domain

Domains in the same PDB:

Structural contacts of domain e3udcD4 of H-group "Mechanosensitive channel protein MscS (YggB), C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3udcE4	D:X,Y,Z->E:x,y,z	Mechanosensitive channel protein MscS (YggB), C-terminal domain	Interaction Interface Pymol
e3udcA3	D:x,y,z->A:X,Y,Z	SH3	Interaction Interface Pymol
e3udcA1	D:x,y,z->A:X,Y,Z	Mechanosensitive channel protein MscS (YggB), C-terminal domain	Interaction Interface Pymol
e3udcE6	D:x,y,z->E:-X-1,Y-1/2,-Z-1/2	Mechanosensitive channel protein MscS (YggB), transmembrane region	Interaction Interface Pymol
e3udcG4	D:x,y,z->G:X-1/2,-Y+1/2,-Z	Mechanosensitive channel protein MscS (YggB), C-terminal domain	Interaction Interface Pymol
e3udcB4	D:x,y,z->B:X,Y,Z	Mechanosensitive channel protein MscS (YggB), C-terminal domain	Interaction Interface Pymol
e3udcF4	D:X,Y,Z->F:x,y,z	Mechanosensitive channel protein MscS (YggB), C-terminal domain	Interaction Interface Pymol

e3udcA2	A:13-111	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region
e3udcA3	A:112-177	SH3	SH3	SH3
e3udcA1	A:178-279	Alpha-beta plaits	Mechanosensitive channel protein MscS (YggB), C-terminal domain	Mechanosensitive channel protein MscS (YggB), C-terminal domain
e3udcB6	B:13-111	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region
e3udcB5	B:112-177	SH3	SH3	SH3
e3udcB4	B:178-279	Alpha-beta plaits	Mechanosensitive channel protein MscS (YggB), C-terminal domain	Mechanosensitive channel protein MscS (YggB), C-terminal domain
e3udcC6	C:13-111	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region
e3udcC5	C:112-177	SH3	SH3	SH3
e3udcC4	C:178-279	Alpha-beta plaits	Mechanosensitive channel protein MscS (YggB), C-terminal domain	Mechanosensitive channel protein MscS (YggB), C-terminal domain
e3udcD6	D:13-111	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region
e3udcD5	D:112-177	SH3	SH3	SH3
e3udcD4	D:178-279	Alpha-beta plaits	Mechanosensitive channel protein MscS (YggB), C-terminal domain	Mechanosensitive channel protein MscS (YggB), C-terminal domain
e3udcE6	E:13-111	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region
e3udcE5	E:112-177	SH3	SH3	SH3
e3udcE4	E:178-279	Alpha-beta plaits	Mechanosensitive channel protein MscS (YggB), C-terminal domain	Mechanosensitive channel protein MscS (YggB), C-terminal domain
e3udcF6	F:13-111	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region
e3udcF5	F:112-177	SH3	SH3	SH3
e3udcF4	F:178-279	Alpha-beta plaits	Mechanosensitive channel protein MscS (YggB), C-terminal domain	Mechanosensitive channel protein MscS (YggB), C-terminal domain
e3udcG6	G:13-111	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region	Mechanosensitive channel protein MscS (YggB), transmembrane region
e3udcG5	G:112-177	SH3	SH3	SH3
e3udcG4	G:178-279	Alpha-beta plaits	Mechanosensitive channel protein MscS (YggB), C-terminal domain	Mechanosensitive channel protein MscS (YggB), C-terminal domain