Domain ID e3udlC2

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RdRP_3
UID: 000436596
Type: Automatic domain
Parent: e1gx5A2
Range: C:1-353
PDB: 3udl
PDB Description: HCV NS5B POLYMERASE
UniProt: P26663
Species:

Structure of domain e3udlC2

Domains in the same chain:

e3udlC2 C:1-353 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3udlC1 C:354-563 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases

Domains in the same PDB:

e3udlA2 A:1-353 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3udlA1 A:354-563 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3udlB2 B:1-353 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3udlB1 B:354-563 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3udlC2 C:1-353 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3udlC1 C:354-563 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3udlD2 D:1-353 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3udlD1 D:354-563 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases

Structural contacts of domain e3udlC2 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3udlB2 C:X-1/2,-Y+3/2,-Z+2->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3udlA1 C:X-1/2,-Y+1/2,-Z+1->A:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3udlD2 C:X-1/2,-Y+1/2,-Z+1->D:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3udlA1 C:X-1,Y,Z-1->A:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3udlA2 C:X-1,Y,Z-1->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol