Domain ID e3ugqA2

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  • A: a/b three-layered sandwiches
  • X: Anticodon-binding domain of Class II aaRS
  • H: Anticodon-binding domain of Class II aaRS
  • T: Anticodon-binding domain of Class II aaRS
  • F: HGTP_anticodon
UID: 000148219
Type: Automatic domain
Parent: e1kmmA2
Range: A:341-462
Ligands: K
PDB: 3ugq
PDB Description: Threonyl-tRNA synthetase, mitochondrial
UniProt: P07236
Hsap BLAST neighbor: Q9BW92
Species:

Structure of domain e3ugqA2

Structural contacts of domain e3ugqA2 of H-group "Anticodon-binding domain of Class II aaRS":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ugqA1 A:x,y,z->A:-Y,-X,-Z-1/2 Class II aaRS and biotin synthetases Interaction Interface Pymol
e3ugqA2 A:x,y,z->A:-Y,-X,-Z-1/2 Anticodon-binding domain of Class II aaRS Interaction Interface Pymol
e3ugqA2 A:-Y,-X,-Z-1/2->A:x,y,z Anticodon-binding domain of Class II aaRS Interaction Interface Pymol
e3ugqA1 A:-Y,-X,-Z-1/2->A:x,y,z Class II aaRS and biotin synthetases Interaction Interface Pymol
e3ugqA1 A:x,y,z->A:-Y-1/2,X+1/2,Z-1/4 Class II aaRS and biotin synthetases Interaction Interface Pymol
e3ugqA1 A:x,y,z->A:-Y-1/2,X-1/2,Z-1/4 Class II aaRS and biotin synthetases Interaction Interface Pymol
e3ugqA1 A:x,y,z->A:-Y-1,-X,-Z-1/2 Class II aaRS and biotin synthetases Interaction Interface Pymol
e3ugqA2 A:x,y,z->A:X-1/2,-Y+1/2,-Z-3/4 Anticodon-binding domain of Class II aaRS Interaction Interface Pymol
e3ugqA2 A:X-1/2,-Y+1/2,-Z-3/4->A:x,y,z Anticodon-binding domain of Class II aaRS Interaction Interface Pymol
e3ugqA1 A:x,y,z->A:X-1/2,-Y-1/2,-Z-3/4 Class II aaRS and biotin synthetases Interaction Interface Pymol