ECOD: domain e3upuB4

Domain ID e3upuB4

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: UvrD_C_2

UID:	001233326
Type:	Automatic domain
Parent:	e1w36D2
Range:	B:178-259,B:390-439
PDB:	3upu
PDB Description:	ATP-dependent DNA helicase dda
UniProt:	P32270
Species:

Domain
In chain context
In PDB context

Structure of domain e3upuB4

Domains in the same chain:

Download Pymol

e3upuB5	B:1-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3upuB4	B:178-259,B:390-439	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3upuB6	B:260-389	SH3	SH3	SH3

Domains in the same PDB:

e3upuA1	A:1-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3upuA3	A:178-259,A:390-439	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3upuA2	A:260-389	SH3	SH3	SH3
e3upuB5	B:1-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3upuB4	B:178-259,B:390-439	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3upuB6	B:260-389	SH3	SH3	SH3
e3upuC5	C:1-178	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3upuC4	C:178-259,C:390-439	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3upuC6	C:260-389	SH3	SH3	SH3

Structural contacts of domain e3upuB4 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3upuC5	B:x,y,z->C:-X+1/2,Y-1/2,-Z-1	P-loop domains-related	Interaction Interface Pymol
e3upuC4	B:x,y,z->C:X,Y,Z-1	P-loop domains-related	Interaction Interface Pymol