| UID: | 000972398 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1z0jB1 |
| Range: | D:-1-46 |
| Ligands: | 1PE CO |
| PDB: | 3v1d |
| PDB Description: | Computational design, MID1-cobalt |
| Hsap BLAST neighbor: | Q9H1K0 |
| Species: | synthetic construct |
Structure of domain e3v1dD1
Domains in the same chain:
| e3v1dD1 | D:-1-46 | Long alpha-hairpin | Rabenosyn-5 Rab-binding domain-like | Rabenosyn-5 Rab-binding domain-like |
Domains in the same PDB:
Structural contacts of domain e3v1dD1 of H-group "Rabenosyn-5 Rab-binding domain-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3v1dG1 | D:X,Y,Z->G:x,y,z | Rabenosyn-5 Rab-binding domain-like | Interaction Interface Pymol |
| e3v1dB1 | D:x,y,z->B:X-1,Y+1,Z | Rabenosyn-5 Rab-binding domain-like | Interaction Interface Pymol |
| e3v1dB1 | D:X,Y-1,Z->B:x,y,z | Rabenosyn-5 Rab-binding domain-like | Interaction Interface Pymol |
| e3v1dG1 | D:x,y,z->G:X-1,Y,Z | Rabenosyn-5 Rab-binding domain-like | Interaction Interface Pymol |
| e3v1dF1 | D:X,Y,Z->F:x,y,z | Rabenosyn-5 Rab-binding domain-like | Interaction Interface Pymol |
| e3v1dF1 | D:X,Y,Z-1->F:x,y,z | Rabenosyn-5 Rab-binding domain-like | Interaction Interface Pymol |
| e3v1dH1 | D:X,Y-1,Z->H:x,y,z | Rabenosyn-5 Rab-binding domain-like | Interaction Interface Pymol |
| e3v1dH1 | D:X,Y-1,Z-1->H:x,y,z | Rabenosyn-5 Rab-binding domain-like | Interaction Interface Pymol |
| e3v1dF1 | D:x,y,z->F:X-1,Y,Z | Rabenosyn-5 Rab-binding domain-like | Interaction Interface Pymol |
| e3v1dD1 | D:x,y,z->D:X-1,Y,Z | Rabenosyn-5 Rab-binding domain-like | Interaction Interface Pymol |
| e3v1dD1 | D:X-1,Y,Z->D:x,y,z | Rabenosyn-5 Rab-binding domain-like | Interaction Interface Pymol |
| e3v1dE1 | D:X-1,Y-1,Z-1->E:x,y,z | Rabenosyn-5 Rab-binding domain-like | Interaction Interface Pymol |
