ECOD: domain e3v2uD4

Domain ID e3v2uD4

A: a+b two layers
X: Ribosomal protein S5 domain 2-like
H: Ribosomal protein S5 domain 2-like
T: Ribosomal protein S5 domain 2-like
F: GHMP_kinases_N,GalKase_gal_bdg

UID:	001202343
Type:	Automatic domain
Parent:	e1pieA2
Range:	D:2-239
Ligands:	ATP GLA MG
PDB:	3v2u
PDB Description:	PROTEIN GAL3
UniProt:	P13045
Hsap BLAST neighbor:	Q01415
Species:

Domain
In chain context
In PDB context

Structure of domain e3v2uD4

Domains in the same chain:

Download Pymol

e3v2uD4	D:2-239	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e3v2uD3	D:240-520	Alpha-beta plaits	GHMP Kinase, C-terminal domain	GHMP Kinase, C-terminal domain

Domains in the same PDB:

e3v2uA1	A:4-153,A:358-435	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e3v2uA2	A:154-357	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e3v2uB6	B:15-150,B:358-435	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e3v2uB5	B:151-325,B:345-357	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e3v2uC1	C:2-242	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e3v2uC2	C:243-520	Alpha-beta plaits	GHMP Kinase, C-terminal domain	GHMP Kinase, C-terminal domain
e3v2uD4	D:2-239	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e3v2uD3	D:240-520	Alpha-beta plaits	GHMP Kinase, C-terminal domain	GHMP Kinase, C-terminal domain

Structural contacts of domain e3v2uD4 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3v2uA2	D:x,y,z->A:X,Y,Z	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	Interaction Interface Pymol
e3v2uA1	D:x,y,z->A:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e3v2uB6	D:X-1,Y-1,Z-1->B:x,y,z	Rossmann-related	Interaction Interface Pymol