| UID: | 001711482 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1wm3A1 |
| Range: | D:20-98 |
| PDB: | 3v62 |
| PDB Description: | Ubiquitin-like protein SMT3 |
| UniProt: | Q12306 |
| Hsap BLAST neighbor: | P63165 |
| Species: |
Structure of domain e3v62D1
Domains in the same chain:
| e3v62D1 | D:20-98 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
Domains in the same PDB:
| e3v62A1 | A:20-98 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
| e3v62B1 | B:1-126 | DNA clamp | DNA clamp | DNA clamp |
| e3v62B2 | B:127-256 | DNA clamp | DNA clamp | DNA clamp |
| e3v62D1 | D:20-98 | beta-Grasp | Ubiquitin-related | Ubiquitin-like |
| e3v62E1 | E:1-126 | DNA clamp | DNA clamp | DNA clamp |
| e3v62E2 | E:127-256 | DNA clamp | DNA clamp | DNA clamp |
Structural contacts of domain e3v62D1 of H-group "Ubiquitin-related":
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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3v62E2 | D:X,Y,Z->E:x,y,z | DNA clamp | Interaction Interface Pymol |
| e3v62B2 | D:x,y,z->B:X-1/2,Y+1/2,Z-1 | DNA clamp | Interaction Interface Pymol |
| e3v62B1 | D:x,y,z->B:X-1/2,Y+1/2,Z-1 | DNA clamp | Interaction Interface Pymol |
| e3v62A1 | D:x,y,z->A:-X+1,Y,-Z+1 | Ubiquitin-related | Interaction Interface Pymol |
| e3v62A1 | D:x,y,z->A:X-1/2,Y+1/2,Z-1 | Ubiquitin-related | Interaction Interface Pymol |
