ECOD: domain e3v6hB5

Domain ID e3v6hB5

A: a+b two layers
X: Alpha-beta plaits
H: Adenylyl and guanylyl cyclase catalytic domain-like
T: Adenylyl and guanylyl cyclase catalytic domain-like
F: IMS

UID:	001256303
Type:	Automatic domain
Parent:	e1t3nA4
Range:	B:1-21,B:77-177
Ligands:	CA DCP MG
PDB:	3v6h
PDB Description:	DNA POLYMERASE IV
UniProt:	Q97W02
Hsap BLAST neighbor:	Q9UBZ9
Species:

Domains in the same chain:

Download Pymol

e3v6hB5	B:1-21,B:77-177	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e3v6hB8	B:22-76	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like
e3v6hB7	B:178-240	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e3v6hB6	B:241-342	Reverse ferredoxin	Lesion bypass DNA polymerase (Y-family), little finger domain	Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e3v6hA5	A:0-21,A:77-177	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e3v6hA7	A:22-76	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like
e3v6hA6	A:178-240	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e3v6hA2	A:241-342	Reverse ferredoxin	Lesion bypass DNA polymerase (Y-family), little finger domain	Lesion bypass DNA polymerase (Y-family), little finger domain
e3v6hB5	B:1-21,B:77-177	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e3v6hB8	B:22-76	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like	Hypothetical protein Ta1206-like
e3v6hB7	B:178-240	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e3v6hB6	B:241-342	Reverse ferredoxin	Lesion bypass DNA polymerase (Y-family), little finger domain	Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e3v6hB5 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3v6hA5	B:x,y,z->A:X,Y,Z	Adenylyl and guanylyl cyclase catalytic domain-like	Interaction Interface Pymol
e3v6hA6	B:X,Y,Z-1->A:x,y,z	SAM/DNA-glycosylase	Interaction Interface Pymol