Domain ID e3v6kA5

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: IMS
UID: 001256299
Type: Automatic domain
Parent: e1t3nA4
Range: A:1-21,A:77-177
Ligands: MG
PDB: 3v6k
PDB Description: DNA POLYMERASE IV
UniProt: Q97W02
Hsap BLAST neighbor: Q9UBZ9
Species:

Structure of domain e3v6kA5

Domains in the same chain:

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e3v6kA5 A:1-21,A:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3v6kA8 A:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3v6kA7 A:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3v6kA6 A:241-342 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Domains in the same PDB:

e3v6kA5 A:1-21,A:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3v6kA8 A:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3v6kA7 A:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3v6kA6 A:241-342 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain
e3v6kJ5 J:1-21,J:77-177 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3v6kJ8 J:22-76 Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like Hypothetical protein Ta1206-like
e3v6kJ7 J:178-240 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e3v6kJ6 J:241-342 Reverse ferredoxin Lesion bypass DNA polymerase (Y-family), little finger domain Lesion bypass DNA polymerase (Y-family), little finger domain

Structural contacts of domain e3v6kA5 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3v6kA6 A:-X,Y-1/2,-Z+1->A:x,y,z Lesion bypass DNA polymerase (Y-family), little finger domain Interaction Interface Pymol
e3v6kA8 A:-X+1,Y-1/2,-Z+1->A:x,y,z Hypothetical protein Ta1206-like Interaction Interface Pymol