| UID: | 001178470 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1u2fA1 |
| Range: | A:143-229 |
| Ligands: | DIO GOL SO4 |
| PDB: | 3vaf |
| PDB Description: | Splicing factor U2AF 65 kDa subunit |
| UniProt: | P26368 |
| Hsap BLAST neighbor: | P26368 |
| Species: | Homo sapiens |
Structure of domain e3vafA4
Domains in the same chain:
| e3vafA4 | A:143-229 | Alpha-beta plaits | RNA-binding domain, RBD | RNA-binding domain, RBD |
| e3vafA3 | A:230-336 | Alpha-beta plaits | RNA-binding domain, RBD | RNA-binding domain, RBD |
Domains in the same PDB:
Structural contacts of domain e3vafA4 of H-group "RNA-binding domain, RBD":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3vafA3 | A:x,y,z->A:X,Y-1,Z | RNA-binding domain, RBD | Interaction Interface Pymol |
| e3vafB1 | A:-X+3/2,Y-1/2,-Z+3->B:x,y,z | RNA-binding domain, RBD | Interaction Interface Pymol |
| e3vafB1 | A:X,Y,Z->B:x,y,z | RNA-binding domain, RBD | Interaction Interface Pymol |
| e3vafB2 | A:X,Y,Z->B:x,y,z | RNA-binding domain, RBD | Interaction Interface Pymol |
| e3vafA3 | A:x,y,z->A:-X+1,Y-1,-Z+3 | RNA-binding domain, RBD | Interaction Interface Pymol |
