Domain ID e3vagA2

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: RNA-binding domain, RBD
  • T: RNA-binding domain, RBD
  • F: RRM_1
UID: 000971987
Type: Automatic domain
Parent: e2u2fA1
Range: A:229-336
Ligands: DIO SO4
PDB: 3vag
PDB Description: Splicing factor U2AF 65 kDa subunit
UniProt: P26368
Hsap BLAST neighbor: P26368
Species: Homo sapiens

Structure of domain e3vagA2

Structural contacts of domain e3vagA2 of H-group "RNA-binding domain, RBD":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vagA2 A:x,y,z->A:X,Y-1,Z RNA-binding domain, RBD Interaction Interface Pymol
e3vagA1 A:X,Y-1,Z->A:x,y,z RNA-binding domain, RBD Interaction Interface Pymol
e3vagA2 A:X,Y-1,Z->A:x,y,z RNA-binding domain, RBD Interaction Interface Pymol
e3vagB1 A:x,y,z->B:X-1/2,Y+1/2,Z RNA-binding domain, RBD Interaction Interface Pymol
e3vagB1 A:x,y,z->B:X-1/2,Y+3/2,Z RNA-binding domain, RBD Interaction Interface Pymol
e3vagA1 A:-X,Y-1,-Z+1->A:x,y,z RNA-binding domain, RBD Interaction Interface Pymol
e3vagA2 A:x,y,z->A:-X,Y,-Z+1 RNA-binding domain, RBD Interaction Interface Pymol
e3vagA2 A:-X,Y,-Z+1->A:x,y,z RNA-binding domain, RBD Interaction Interface Pymol