Domain ID e3vb5B1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: FMN-binding split barrel
  • F: Peptidase_C30
UID: 001097066
Type: Automatic domain
Parent: e2ducA2
Range: B:1-186
Ligands: EDO
PDB: 3vb5
PDB Description: 3C-LIKE PROTEINASE
UniProt: P0C6U8
Species:

Structure of domain e3vb5B1

Structural contacts of domain e3vb5B1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vb5A2 B:x,y,z->A:X,Y,Z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e3vb5A1 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e3vb5A1 B:X-1,Y,Z->A:x,y,z RIFT-related Interaction Interface Pymol
e3vb5A2 B:X-1,Y,Z->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol
e3vb5B1 B:x,y,z->B:-X+1,Y-1/2,-Z+1 RIFT-related Interaction Interface Pymol
e3vb5B1 B:-X+1,Y-1/2,-Z+1->B:x,y,z RIFT-related Interaction Interface Pymol
e3vb5A1 B:-X+1,Y-1/2,-Z+1->A:x,y,z RIFT-related Interaction Interface Pymol
e3vb5A2 B:-X,Y-1/2,-Z->A:x,y,z Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) C-terminal domain Interaction Interface Pymol