ECOD: domain e3vd8A1

Domain ID e3vd8A1

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: SBP_bac_1

UID:	001525721
Type:	Automatic domain
Parent:	e4tsmB3
Range:	A:112-261
Ligands:	EDO K MTT
PDB:	3vd8
PDB Description:	Maltose-binding periplasmic protein, Interferon-inducible protein AIM2
UniProt:	P0AEY0
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3vd8A1

Domains in the same chain:

Download Pymol

e3vd8A3	A:1-116,A:263-368	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3vd8A1	A:112-261	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3vd8A2	A:1001-1097	DEATH domain	DEATH domain	DEATH domain

Domains in the same PDB:

e3vd8A3	A:1-116,A:263-368	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3vd8A1	A:112-261	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3vd8A2	A:1001-1097	DEATH domain	DEATH domain	DEATH domain

Structural contacts of domain e3vd8A1 of H-group "Periplasmic binding protein-like II":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3vd8A2	A:X-1/2,-Y+1/2,-Z->A:x,y,z	DEATH domain	Interaction Interface Pymol
e3vd8A2	A:x,y,z->A:-X-1/2,-Y,Z-1/2	DEATH domain	Interaction Interface Pymol
e3vd8A2	A:x,y,z->A:-X+1/2,-Y,Z-1/2	DEATH domain	Interaction Interface Pymol