ECOD: domain e3vdgA1

Domain ID e3vdgA1

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: MR_MLE_C

UID:	000147641
Type:	Automatic domain
Parent:	e1r6wA2
Range:	A:139-423
Ligands:	ACT FMT NA
PDB:	3vdg
PDB Description:	Probable glucarate dehydratase
UniProt:	A0R5B5
Species:

Domains in the same chain:

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e3vdgA2	A:0-138	Enolase-N/ribosomal protein	Enolase N-terminal domain-like	Enolase N-terminal domain-like
e3vdgA1	A:139-423	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Domains in the same PDB:

e3vdgA2	A:0-138	Enolase-N/ribosomal protein	Enolase N-terminal domain-like	Enolase N-terminal domain-like
e3vdgA1	A:139-423	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Structural contacts of domain e3vdgA1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3vdgA1	A:x,y,z->A:X,X-Y,-Z+1/6	TIM barrels	Interaction Interface Pymol
e3vdgA2	A:x,y,z->A:X,X-Y,-Z+1/6	Enolase N-terminal domain-like	Interaction Interface Pymol
e3vdgA2	A:X,X-Y,-Z+1/6->A:x,y,z	Enolase N-terminal domain-like	Interaction Interface Pymol
e3vdgA1	A:X,X-Y,-Z+1/6->A:x,y,z	TIM barrels	Interaction Interface Pymol
e3vdgA2	A:X-Y+1,X,Z+1/6->A:x,y,z	Enolase N-terminal domain-like	Interaction Interface Pymol
e3vdgA1	A:x,y,z->A:X-Y,-Y+1,-Z	TIM barrels	Interaction Interface Pymol
e3vdgA1	A:X-Y,-Y+1,-Z->A:x,y,z	TIM barrels	Interaction Interface Pymol