ECOD: domain e3vdyA1

Domain ID e3vdyA1

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: SSB

UID:	000148646
Type:	Automatic domain
Parent:	e3ullA1
Range:	A:0-107
PDB:	3vdy
PDB Description:	Single-stranded DNA-binding protein ssbB
UniProt:	C0SPB6
Species:	Bacillus subtilis

Domains in the same chain:

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e3vdyA1	A:0-107	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e3vdyA1	A:0-107	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e3vdyB1	B:-2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Structural contacts of domain e3vdyA1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3vdyB1	A:Y,X,-Z+1->B:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e3vdyA1	A:x,y,z->A:Y,X,-Z+1	Nucleic acid-binding proteins	Interaction Interface Pymol
e3vdyA1	A:Y,X,-Z+1->A:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e3vdyB1	A:X-1/2,-Y+1/2,-Z+5/4->B:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e3vdyB1	A:X,Y,Z->B:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol