ECOD: domain e3vf0B2

Domain ID e3vf0B2

A: a+b two layers
X: Alpha-beta plaits
H: RNA-binding domain, RBD
T: RNA-binding domain, RBD
F: RRM_1

UID:	001275707
Type:	Automatic domain
Parent:	e1fxlA1
Range:	B:130-210
Ligands:	GOL
PDB:	3vf0
PDB Description:	RIBONUCLEOPROTEIN PTB-BINDING 1
UniProt:	Q8IY67
Hsap BLAST neighbor:	Q8IY67
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3vf0B2

Domains in the same chain:

Download Pymol

e3vf0B5	B:37-129	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e3vf0B2	B:130-210	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e3vf0B6	B:211-319	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Domains in the same PDB:

e3vf0A1	A:956-1133	Four-helical up-and-down bundle	alpha-catenin-related	alpha-catenin/vinculin
e3vf0B5	B:37-129	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e3vf0B2	B:130-210	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e3vf0B6	B:211-319	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Structural contacts of domain e3vf0B2 of H-group "RNA-binding domain, RBD":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3vf0A1	B:x,y,z->A:-X+1,-Y+1,Z-1/2	alpha-catenin-related	Interaction Interface Pymol