Domain ID e3vgjA1

Download files:
  • A: a/b three-layered sandwiches
  • X: HUP domain-like
  • H: HUP domains
  • T: HUP domains
  • F: tRNA-synt_1b
UID: 000151433
Type: Automatic domain
Parent: e1j1uA1
Range: A:20-372
Ligands: YAP
PDB: 3vgj
PDB Description: Tyrosyl-tRNA synthetase, putative
UniProt: Q8IAR7
Hsap BLAST neighbor: P54577
Species:

Structure of domain e3vgjA1

Structural contacts of domain e3vgjA1 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vgjB2 A:X,Y,Z->B:x,y,z HUP domains Interaction Interface Pymol
e3vgjA1 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1 HUP domains Interaction Interface Pymol
e3vgjA1 A:-X+1/2,Y-1/2,-Z+1->A:x,y,z HUP domains Interaction Interface Pymol
e3vgjB2 A:X-1/2,Y+1/2,Z->B:x,y,z HUP domains Interaction Interface Pymol
e3vgjA1 A:x,y,z->A:X,Y-1,Z HUP domains Interaction Interface Pymol
e3vgjA1 A:X,Y-1,Z->A:x,y,z HUP domains Interaction Interface Pymol
e3vgjA1 A:x,y,z->A:-X,Y,-Z+1 HUP domains Interaction Interface Pymol
e3vgjA1 A:-X,Y,-Z+1->A:x,y,z HUP domains Interaction Interface Pymol