Domain ID e3vi3D4

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  • A: a/b three-layered sandwiches
  • X: HAD domain-like
  • H: HAD domain-related
  • T: vWA-like
  • F: Integrin_beta
UID: 001156285
Type: Automatic domain
Parent: e1tyeB3
Range: D:118-361
Ligands: CA MG
PDB: 3vi3
PDB Description: Integrin beta-1
UniProt: P05556
Hsap BLAST neighbor: P05556
Species: Homo sapiens

Structure of domain e3vi3D4

Domains in the same chain:

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e3vi3D6 D:5-63 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e3vi3D5 D:64-117,D:362-445 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi3D4 D:118-361 HAD domain-like HAD domain-related vWA-like

Domains in the same PDB:

e3vi3A2 A:1-450 beta-propeller-like beta-propeller 7-bladed
e3vi3A1 A:450-606 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi3B3 B:6-63 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e3vi3B7 B:64-117,B:362-445 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi3B6 B:118-361 HAD domain-like HAD domain-related vWA-like
e3vi3C2 C:1-450 beta-propeller-like beta-propeller 7-bladed
e3vi3C1 C:450-601 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi3D6 D:5-63 Trefoil/Plexin domain-like Trefoil/Plexin domain-like Trefoil/Plexin domain-like
e3vi3D5 D:64-117,D:362-445 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi3D4 D:118-361 HAD domain-like HAD domain-related vWA-like
e3vi3E1 E:1-112 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi3E2 E:113-219 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi3F1 F:1-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi3F2 F:119-218 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi3H2 H:1-118 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi3H1 H:119-218 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi3L1 L:1-112 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3vi3L2 L:113-219 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3vi3D4 of H-group "HAD domain-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3vi3C2 D:x,y,z->C:X,Y,Z beta-propeller Interaction Interface Pymol
e3vi3H2 D:X,Y,Z->H:x,y,z Immunoglobulin-related Interaction Interface Pymol